SNX26

Protein-coding gene in the species Homo sapiens
ARHGAP33
Identifiers
AliasesARHGAP33, NOMA-GAP, SNX26, TCGAP, Rho GTPase activating protein 33
External IDsOMIM: 614902; MGI: 2673998; HomoloGene: 76448; GeneCards: ARHGAP33; OMA:ARHGAP33 - orthologs
Gene location (Human)
Chromosome 19 (human)
Chr.Chromosome 19 (human)[1]
Chromosome 19 (human)
Genomic location for ARHGAP33
Genomic location for ARHGAP33
Band19q13.12Start35,774,532 bp[1]
End35,788,822 bp[1]
Gene location (Mouse)
Chromosome 7 (mouse)
Chr.Chromosome 7 (mouse)[2]
Chromosome 7 (mouse)
Genomic location for ARHGAP33
Genomic location for ARHGAP33
Band7|7 B1Start30,522,226 bp[2]
End30,535,060 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • ventricular zone

  • right uterine tube

  • right hemisphere of cerebellum

  • right frontal lobe

  • C1 segment

  • anterior pituitary

  • right testis

  • left testis

  • right ovary
Top expressed in
  • superior frontal gyrus

  • olfactory tubercle

  • piriform cortex

  • visual cortex

  • primary visual cortex

  • subiculum

  • nucleus accumbens

  • ganglionic eminence

  • ventricular zone

  • prefrontal cortex
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • phosphatidylinositol binding
  • protein binding
  • GTPase activator activity
  • protein kinase binding
Cellular component
  • cytosol
  • cytoplasm
  • plasma membrane
  • cell cortex
  • actin cytoskeleton
  • protein-containing complex
  • dendritic spine
Biological process
  • regulation of small GTPase mediated signal transduction
  • protein transport
  • positive regulation of GTPase activity
  • signal transduction
  • small GTPase mediated signal transduction
  • response to toxic substance
  • regulation of dendritic spine morphogenesis
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

115703

233071

Ensembl

ENSG00000004777

ENSMUSG00000036882

UniProt

O14559

Q80YF9

RefSeq (mRNA)

NM_001172630
NM_052948
NM_001366178

NM_001289670
NM_001289682
NM_178252

RefSeq (protein)

NP_001166101
NP_443180
NP_001353107

NP_001276599
NP_001276611
NP_839983

Location (UCSC)Chr 19: 35.77 – 35.79 MbChr 7: 30.52 – 30.54 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

TC10/CDC42 GTPase-activating protein is an enzyme that in humans is encoded by the SNX26 gene.[5][6][7]

This gene encodes a member of the sorting nexin family. Members of this family contain a phox (PX) domain, which is a phosphoinositide binding domain, and are involved in intracellular trafficking. The specific function of this protein has not been elucidated. Alternative splice variants have been described but their full length nature has not been determined.[7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000004777 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000036882 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Peck J, Douglas G IV, Wu CH, Burbelo PD (Sep 2002). "Human RhoGAP domain-containing proteins: structure, function and evolutionary relationships". FEBS Lett. 528 (1–3): 27–34. doi:10.1016/S0014-5793(02)03331-8. PMID 12297274. S2CID 30443852.
  6. ^ Worby CA, Dixon JE (Dec 2002). "Sorting out the cellular functions of sorting nexins". Nat Rev Mol Cell Biol. 3 (12): 919–31. doi:10.1038/nrm974. PMID 12461558. S2CID 36361630.
  7. ^ a b "Entrez Gene: SNX26 sorting nexin 26".

Further reading

  • Xu Y, Seet LF, Hanson B, Hong W (2002). "The Phox homology (PX) domain, a new player in phosphoinositide signalling". Biochem. J. 360 (Pt 3): 513–30. doi:10.1042/0264-6021:3600513. PMC 1222253. PMID 11736640.
  • Dehal P, Predki P, Olsen AS, et al. (2001). "Human chromosome 19 and related regions in mouse: conservative and lineage-specific evolution". Science. 293 (5527): 104–11. doi:10.1126/science.1060310. PMID 11441184. S2CID 826987.
  • Teasdale RD, Loci D, Houghton F, et al. (2001). "A large family of endosome-localized proteins related to sorting nexin 1". Biochem. J. 358 (Pt 1): 7–16. doi:10.1042/0264-6021:3580007. PMC 1222026. PMID 11485546.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Chiang SH, Hwang J, Legendre M, et al. (2003). "TCGAP, a multidomain Rho GTPase-activating protein involved in insulin-stimulated glucose transport". EMBO J. 22 (11): 2679–91. doi:10.1093/emboj/cdg262. PMC 156759. PMID 12773384.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Grimwood J, Gordon LA, Olsen A, et al. (2004). "The DNA sequence and biology of human chromosome 19". Nature. 428 (6982): 529–35. Bibcode:2004Natur.428..529G. doi:10.1038/nature02399. PMID 15057824.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Liu H, Nakazawa T, Tezuka T, Yamamoto T (2006). "Physical and functional interaction of Fyn tyrosine kinase with a brain-enriched Rho GTPase-activating protein TCGAP". J. Biol. Chem. 281 (33): 23611–9. doi:10.1074/jbc.M511205200. PMID 16777849.
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SNX-BAR
SNX-PX
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  • SNX10
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SNX-Other
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