UBL5

Protein-coding gene in the species Homo sapiens
UBL5
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1P0R, 4PYU

Identifiers
AliasesUBL5, HUB1, ubiquitin like 5
External IDsOMIM: 606849 MGI: 1913427 HomoloGene: 83305 GeneCards: UBL5
Gene location (Human)
Chromosome 19 (human)
Chr.Chromosome 19 (human)[1]
Chromosome 19 (human)
Genomic location for UBL5
Genomic location for UBL5
Band19p13.2Start9,827,892 bp[1]
End9,830,115 bp[1]
Gene location (Mouse)
Chromosome 9 (mouse)
Chr.Chromosome 9 (mouse)[2]
Chromosome 9 (mouse)
Genomic location for UBL5
Genomic location for UBL5
Band9|9 A3Start20,642,878 bp[2]
End20,647,140 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • anterior pituitary

  • right adrenal gland

  • monocyte

  • left lobe of thyroid gland

  • right lobe of thyroid gland

  • left coronary artery

  • right uterine tube

  • islet of Langerhans

  • prefrontal cortex

  • ganglionic eminence
Top expressed in
  • interventricular septum

  • corneal stroma

  • yolk sac

  • lip

  • plantaris muscle

  • superior frontal gyrus

  • visual cortex

  • extensor digitorum longus muscle

  • superior surface of tongue

  • entorhinal cortex
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • protein binding
  • protein tag
Cellular component
  • cytoplasm
  • nucleus
Biological process
  • mRNA splicing, via spliceosome
  • positive regulation of protein targeting to mitochondrion
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

59286

66177

Ensembl

ENSG00000198258

ENSMUSG00000084786

UniProt

Q9BZL1

Q9EPV8

RefSeq (mRNA)

NM_024292
NM_001048241

NM_025401
NM_001310746

RefSeq (protein)

NP_001041706
NP_077268
NP_001041706.1
NP_077268.1

NP_001297675
NP_079677
NP_001347954
NP_001347955
NP_001347956

Location (UCSC)Chr 19: 9.83 – 9.83 MbChr 9: 20.64 – 20.65 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Ubiquitin-like protein 5 is a protein that in humans is encoded by the UBL5 gene.[5]

It has been shown that in C. elegans mitochondria treated to lower expression of certain electron transport chain proteins during the L3/L4 stage, its expression levels is higher leading to increased lifespans.[6]

Ubiquitin-like proteins (UBLs) are thought to be reversible modulators of protein function rather than protein degraders like ubiquitin (MIM 191339).[supplied by OMIM][5]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000198258 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000084786 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b "Entrez Gene: UBL5 ubiquitin-like 5".
  6. ^ Mitochondrial Stress Signals Revise an Old Aging Theory - DOI 10.1016/j.cell.2010.12.023

Further reading

  • Friedman JS, Koop BF, Raymond V, Walter MA (2001). "Isolation of a ubiquitin-like (UBL5) gene from a screen identifying highly expressed and conserved iris genes". Genomics. 71 (2): 252–5. doi:10.1006/geno.2000.6439. PMID 11161819.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Kantham L, Kerr-Bayles L, Godde N, et al. (2003). "Beacon interacts with cdc2/cdc28-like kinases". Biochem. Biophys. Res. Commun. 304 (1): 125–9. doi:10.1016/S0006-291X(03)00549-7. PMID 12705895.
  • McNally T, Huang Q, Janis RS, et al. (2004). "Structural analysis of UBL5, a novel ubiquitin-like modifier". Protein Sci. 12 (7): 1562–6. doi:10.1110/ps.0382803. PMC 2323916. PMID 12824502.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Suzuki Y, Yamashita R, Shirota M, et al. (2004). "Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions". Genome Res. 14 (9): 1711–8. doi:10.1101/gr.2435604. PMC 515316. PMID 15342556.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Wilkinson CR, Dittmar GA, Ohi MD, et al. (2005). "Ubiquitin-like protein Hub1 is required for pre-mRNA splicing and localization of an essential splicing factor in fission yeast". Curr. Biol. 14 (24): 2283–8. doi:10.1016/j.cub.2004.11.058. PMID 15620657.
  • Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.

External links

  • Overview of all the structural information available in the PDB for UniProt: Q9BZL1 (Human Ubiquitin-like protein 5) at the PDBe-KB.
  • Overview of all the structural information available in the PDB for UniProt: Q9EPV8 (Mouse Ubiquitin-like protein 5) at the PDBe-KB.


  • v
  • t
  • e
  • 1p0r: Solution Structure of UBL5 a human Ubiquitin-Like Protein
    1p0r: Solution Structure of UBL5 a human Ubiquitin-Like Protein
  • 1uh6: Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06
    1uh6: Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06


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